Common Carp Genome Project Publications

  • Zhao L, Zhang Y, Ji P, Zhang X, Zhao Z, Hou G, et al.
    A dense genetic linkage map for common carp and its integration with a BAC-based physical map.
    PLoS One. 2013;8(5):e63928.
  • Zhang Y, Wang S, Li J, Zhang X, Jiang L, Xu P, et al.
    Primary genome scan for complex body shape-related traits in the common carp Cyprinus carpio.
    Journal of fish biology. 2013;82(1):125-40.
  • Zhang X, Zhang Y, Zheng X, Kuang Y, Zhao Z, Zhao L, et al.
    A consensus linkage map provides insights on genome character and evolution in common carp (Cyprinus carpio L.).
    Marine biotechnology. 2013;15(3):275-312.
  • Xue W, Li JT, Zhu YP, Hou GY, Kong XF, Kuang YY, et al.
    L_RNA_scaffolder: scaffolding genomes with transcripts.
    BMC genomics. 2013;14:604.
  • Xue W, Hou GY, Li CY, Kong XF, Zheng XH, Li JT, et al.
    Complete mitochondrial genome of Chinese sleeper, Perccottus glenii.
    Mitochondrial DNA. 2013;24(4):339-41.
  • Xu J, Li Q, Xu L, Wang S, Jiang Y, Zhao Z, et al.
    Gene expression changes leading extreme alkaline tolerance in Amur ide (Leuciscus waleckii) inhabiting soda lake.
    BMC genomics. 2013;14:682.
  • Wang K, Wang B, Li J, Chen K, Xu P, Sun X.
    The complete mitochondrial genome of Channa maculata (Perciformes: Channidae).
    Mitochondrial DNA. 2013;24(4):362-4.
  • Wang B, Ji P, Xu J, Sun J, Yang J, Xu P, et al.
    Complete mitochondrial genome of Leuciscus waleckii (Cypriniformes: Cyprinidae: Leuciscus).
    Mitochondrial DNA. 2013;24(2):126-8.
  • Wang B, Ji P, Wang J, Sun J, Wang C, Xu P, et al.
    The complete mitochondrial genome of the Oujiang color carp, Cyprinus carpio var. color (Cypriniformes, Cyprinidae).
    Mitochondrial DNA. 2013;24(1):19-21.
  • Liu YX, Han HZ, Wang QL, Jiang L, Wang SL, Zhang XY, et al.
    Choice of microsatellite markers for identifying homozygosity of mitotic gynogenetic diploids in Japanese flounder Paralichthys olivaceus.
    Journal of fish biology. 2013;82(2):588-99.
  • Li Jiang AC, Yangyang Wang, Baoyong Zhang.
    Genomic and expression analysis of a solute carrier protein (CcSLC25a5) gene from Cyprinus carpio Linnaeus.
    Springer plus. 2013;2:458.
  • Laghari MY, Zhang Y, Lashari P, Zhang X, Xu P, Xin B, et al.
    Quantitative trait loci (QTL) associated with growth rate trait in common carp (Cyprinus carpio).
    Aquaculture International. 2013;21(6):1373-9.
  • Jiang L, Wang Y, Cheng A, Zhang B, Ma L, Liu Y, et al.
    The role of CcTpt1 in scale and early embryo development in common carp (Cyprinus carpio, Cyprinidae).
    Molecular biology reports. 2013.
  • Jian Xu PJ, Baosen Wang,Lan Zhao,Jian Wang,Zixia Zhao,Yan Zhang,Jiongtang Li,Peng Xu, Xiaowen Sun.
    Transcriptome Sequencing and Analysis of Wild Amur Ide (Leuciscus waleckii) Inhabiting an Extreme Alkaline-Saline Lake Reveals Insights into Stress Adaptation.
    PLOS ONE. 2013;8(4):e59703.
  • Gao H, Liu Y, Zhang T, Yang R, Yang H.
    Statistical models for jointly analyzing multiple allometries.
    Journal of theoretical biology. 2013;318:205-9.
  • Liao X, Cheng L, Xu P, Lu G, Wachholtz M, Sun X, Chen S.
    Transcriptome Analysis of Crucian Carp (Carassius auratus),an Important Aquaculture and Hypoxia-Tolerant Species.
    PLOS ONE. 2013;8(4).
  • Xu, J., Ji, P., Zhao, Z., Zhang, Y., Feng, J., Wang, J., Li, J., Zhang, X., Zhao, L., and Liu, G., Xu, P. and Sun X.
    Genome-Wide SNP Discovery from Transcriptome of Four Common Carp Strains.
    PLOS ONE, 2012. 7(10): p. e48140.
  • Zhu, Y.P., Xue, W., Wang, J.T., Wan, Y.M., Wang, S.L., Xu, P., Zhang, Y., Li, J.T., and Sun, X.W.
    Identification of common carp (Cyprinus carpio) microRNAs and microRNA-related SNPs.
    BMC Genomics, 2012. 13(1): p. 413
  • Zhang, X., Zhang, Y., Zheng, X., Kuang, Y., Zhao, Z., Zhao, L., Li, C., Jiang, L., Cao, D., Lu, C., Xu, P., and Sun, X.
    A Consensus Linkage Map Provides Insights on Genome Character and Evolution in Common Carp (Cyprinus carpio L.).
    Marine Biotechnology: epub-ahead
  • Ji, P., Liu G., Xu J., Wang X., Li J., Zhao Z., Zhang X., Zhang Y., Xu, P., and Sun X.
    Characterization of Common Carp Transcriptome: Sequencing, De Novo Assembly, Annotation and Comparative Genomics.
    PLoS ONE 2012, 7: e35152.
  • Xu, P., Wang J., Wang JT., Cui R., Li Y, Zhao Z., Ji P., Zhang Y., Li J., Sun X.
    Generation of the first BAC-based physical map of the common carp genome.
    BMC Genomics, 2011
  • Xu, P., Li J., Li Y., Cui R., Wang J., Wang J., Zhang Y., Zhao Z., Sun X.
    Genomic insight into the common carp (Cyprinus carpio) genome by sequencing analysis of BAC-end sequences.
    BMC Genomics 2011, 12:188
  • Li Y., Xu, P., Zhao Z., Wang J., Zhang Y., Sun X.
    Construction and Characterization of the BAC Library for Common Carp Cyprinus Carpio L. and Establishment of Microsynteny with Zebrafish Danio Rerio.
    Marine Biotechnology 2011, 13(4):706-12